Chapter 11 WGCNA Module
This module is implemented by the WGCNA R package, which is a tool to build weighted gene correlation networks for expression data. The module contains two functional tabs: Dendrogram and Gene Clusters.
11.1 Dendrogram
If the data set is a the saved projects in the CSV file, the precomputed results will be directly loaded based on up to 10,000 genes with default parameter values. For other data set or if the user want to re-run WGCNA on the saved project with a different parameter or number of genes, just click ‘Re-run’ and wait for a few minutes, the results will show up once the analysis is done.